<?xml version="1.0" encoding="UTF-8"?><xml><records><record><source-app name="Biblio" version="7.x">Drupal-Biblio</source-app><ref-type>17</ref-type><contributors><authors><author><style face="normal" font="default" size="100%">Rezi Riadhi Syahdi</style></author><author><style face="normal" font="default" size="100%">Chindy Dwi Martinah</style></author><author><style face="normal" font="default" size="100%">Arry Yanuar</style></author></authors></contributors><titles><title><style face="normal" font="default" size="100%">Virtual Screening of Indonesian Herbal Database as alpha-Amino-3- Hydroxy-5-Methyl-4 Isoxazolepropionic Acid (AMPA) Antagonist</style></title><secondary-title><style face="normal" font="default" size="100%">Pharmacognosy Journal</style></secondary-title></titles><keywords><keyword><style  face="normal" font="default" size="100%">AMPA receptor</style></keyword><keyword><style  face="normal" font="default" size="100%">AutoDock</style></keyword><keyword><style  face="normal" font="default" size="100%">Herbal plants</style></keyword><keyword><style  face="normal" font="default" size="100%">Neuroprotective</style></keyword><keyword><style  face="normal" font="default" size="100%">Virtual Screening</style></keyword></keywords><dates><year><style  face="normal" font="default" size="100%">2019</style></year><pub-dates><date><style  face="normal" font="default" size="100%">October 2019</style></date></pub-dates></dates><volume><style face="normal" font="default" size="100%">11</style></volume><pages><style face="normal" font="default" size="100%">1204-1210</style></pages><language><style face="normal" font="default" size="100%">eng</style></language><abstract><style face="normal" font="default" size="100%">&lt;p class=&quot;rtejustify&quot;&gt;&lt;strong&gt;Objective:&lt;/strong&gt; Ischemic stroke is one type of circulatory disturbance caused by blood clots that block blood flow to the brain. One of the impact of ischemia is nerve cell damage due to excitotoxicity. Inhibition of the ionotropic glutamate receptor such as the AMPA receptor, becomes an essential approach to the treatment of ischemia. This study aims to explore the possibility of an Indonesian herbal compound as an AMPA receptor antagonist. &lt;strong&gt;Methods:&lt;/strong&gt; In this study, virtual screening of 2233 herbal compounds was performed by docking method using AutoDock to find the antagonist candidate of AMPA receptor from Indonesian herbal database. The virtual screening method was validated by an area under curve (AUC) of the ROC curve and enrichment factor (EF). Lipinski’s Rule of Five was used to filter the screening result. &lt;strong&gt;Results:&lt;/strong&gt; The validation of virtual screening result showed that AUC was 0.9385 and EF 1% was 23.5550. The screening result of Indonesian herbal database showed top five compound sanggenol O, blazeispirol X, progesterone, nimolicinol and boeravinone F (-8.51; -8.39; -8.19; -8.17; -8.08 kcal/mol, respectively) and have interaction with TYR61 and THR91 residues of AMPA receptor. &lt;strong&gt;Conclusion:&lt;/strong&gt; Five compounds of the Indonesia herbal database were shown as hits of AMPA receptor antagonist based on the docking method.&lt;/p&gt;
</style></abstract><issue><style face="normal" font="default" size="100%">6</style></issue><work-type><style face="normal" font="default" size="100%">Original Article</style></work-type><section><style face="normal" font="default" size="100%">1204</style></section><auth-address><style face="normal" font="default" size="100%">&lt;p class=&quot;rtejustify&quot;&gt;&lt;strong&gt;Rezi Riadhi Syahdi, Chindy Dwi Martinah, Arry Yanuar* &lt;/strong&gt;&lt;/p&gt;

&lt;p class=&quot;rtejustify&quot;&gt;Biomedical Computation and Drug Design Laboratory, Faculty of Pharmacy, Universitas Indonesia, Depok, INDONESIA.&lt;/p&gt;
</style></auth-address></record><record><source-app name="Biblio" version="7.x">Drupal-Biblio</source-app><ref-type>17</ref-type><contributors><authors><author><style face="normal" font="default" size="100%">Sayani Banerjee</style></author><author><style face="normal" font="default" size="100%">Shefali Pandey</style></author><author><style face="normal" font="default" size="100%">Purbasha Mukherjee</style></author><author><style face="normal" font="default" size="100%">Afia Sayeed</style></author><author><style face="normal" font="default" size="100%">Apoorva Vasant Pandurangi</style></author><author><style face="normal" font="default" size="100%">Shinomol George</style></author><author><style face="normal" font="default" size="100%">Sahabudeen Sheik Mohideen</style></author></authors></contributors><titles><title><style face="normal" font="default" size="100%">Investigation of cytotoxicity induced by Nigella sativa and Azadirachta indica using MDA-MB-231, HCT 116 and SHSY5Y cell lines</style></title><secondary-title><style face="normal" font="default" size="100%">Pharmacognosy Journal</style></secondary-title></titles><keywords><keyword><style  face="normal" font="default" size="100%">Ayurvedic medicine</style></keyword><keyword><style  face="normal" font="default" size="100%">Cancer cells</style></keyword><keyword><style  face="normal" font="default" size="100%">Herbal plants</style></keyword><keyword><style  face="normal" font="default" size="100%">Neuronal cells</style></keyword></keywords><dates><year><style  face="normal" font="default" size="100%">2017</style></year><pub-dates><date><style  face="normal" font="default" size="100%">February 2017</style></date></pub-dates></dates><urls><web-urls><url><style face="normal" font="default" size="100%">http://phcogj.com/fulltext/298</style></url></web-urls></urls><volume><style face="normal" font="default" size="100%">9</style></volume><pages><style face="normal" font="default" size="100%">192-195</style></pages><language><style face="normal" font="default" size="100%">eng</style></language><abstract><style face="normal" font="default" size="100%">&lt;p style=&quot;text-align: justify;&quot;&gt;&lt;strong&gt;Background:&lt;/strong&gt; Indian herbal plants are widely used as medicine in the ancient ayurvedic and culinary purposes. &lt;em&gt;Nigella sativa&lt;/em&gt; that also called as in black cumin is a flowering plant in the family &lt;em&gt;ranunculiceae&lt;/em&gt; that is native to Southeast Asia. More recently &lt;em&gt;Nigella sativa&lt;/em&gt; is also been used as anti cancer drug and protective agent against gamma radiation induced adverse effects in cell lines. &lt;em&gt;Azadirachta indica&lt;/em&gt; commonly called as neem, is a tree belonging to mahogany family meliaceae. &lt;em&gt;Azadirachta indica&lt;/em&gt; is also a traditional medicinal plant that used from a very long time in Indian ayurvedic and it is also been reported to have many beneficial effects including but not limited to anti-cancer and anti-diabetic effects. &lt;strong&gt;Objective:&lt;/strong&gt; Find the IC&lt;sub&gt;50&lt;/sub&gt; values of &lt;em&gt;Nigella sativa&lt;/em&gt; and &lt;em&gt;Azadirachta indica&lt;/em&gt; ethanolic extracts in MDA-MB-231, HCT 116 and SHSY5Y cell lines. &lt;strong&gt;Methods:&lt;/strong&gt; In this study we selected two cancerous cell lines (MDA-MB-231, HCT 116) and one neuronal cell line (SHSY5Y) and studied the effect of the two plant extracts namely &lt;em&gt;Nigella sativa&lt;/em&gt; and &lt;em&gt;Azadirachta indica&lt;/em&gt; on the cell metabolic activity. &lt;strong&gt;Results:&lt;/strong&gt; This study revealed that cancerous cell lines are more prone to the plant extracts than the neuronal cell lines. These results suggest positive clues on how such medicinal plant extracts act against cancerous cells alone while affecting the normal cells to a limited extent. However, further studies are required to find if this effect is due to cytotoxicity, cytostaticity, or anti-adhesive property.&lt;/p&gt;</style></abstract><issue><style face="normal" font="default" size="100%">2</style></issue><work-type><style face="normal" font="default" size="100%">Original Article</style></work-type><section><style face="normal" font="default" size="100%">192</style></section><auth-address><style face="normal" font="default" size="100%">&lt;p style=&quot;text-align: justify;&quot;&gt;&lt;strong&gt;Sayani Banerjee&lt;sup&gt;1#&lt;/sup&gt;, Shefali Pandey&lt;sup&gt;1#&lt;/sup&gt;, Purbasha Mukherjee&lt;sup&gt;1#&lt;/sup&gt;, Afia Sayeed&lt;sup&gt;1#&lt;/sup&gt;, Apoorva Vasant Pandurangi&lt;sup&gt;1#&lt;/sup&gt;, Shinomol George&lt;sup&gt;1&lt;/sup&gt;, Sahabudeen Sheik Mohideen&lt;sup&gt;2&lt;/sup&gt;* &lt;/strong&gt;&lt;/p&gt;
&lt;p style=&quot;text-align: justify;&quot;&gt;&lt;sup&gt;1&lt;/sup&gt;Department of Biotechnology, Dayananda Sagar College of Engineering, Kumaraswamy Layout, Bangalore &amp;ndash;560 078, Karnataka, India.&lt;/p&gt;
&lt;p style=&quot;text-align: justify;&quot;&gt;&lt;sup&gt;2&lt;/sup&gt;Department of Biotechnology, School of Bioengineering, SRM University, Kattankulathur &amp;ndash; 603 203, Kancheepuram Dist., Tamil Nadu, India.&lt;/p&gt;
&lt;h6 style=&quot;text-align: justify;&quot;&gt;&lt;em&gt;&lt;strong&gt;#All authors contributed equally.&amp;nbsp;&lt;/strong&gt;&lt;/em&gt;&lt;/h6&gt;</style></auth-address></record></records></xml>